WormBase Tree Display for Variation: WBVar00054342
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| WBVar00054342 | Name | Public_name | cs53 | ||||
|---|---|---|---|---|---|---|---|
| Other_name | CE26888:p.Trp271Ter | ||||||
| F10C5.1.1:c.813G>A | |||||||
| HGVSg | CHROMOSOME_III:g.476969G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | F10C5 | |||
| Flanking_sequences | gatccgtgagccccgaatctggccagcatg | gaagccttgtctcgattaattgctgatatt | |||||
| Mapping_target | F10C5 | ||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00023876 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00035413 | ||||||
| Laboratory | UP | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003134 | |||||
| Transcript | F10C5.1.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F10C5.1.1:c.813G>A | ||||||
| HGVSp | CE26888:p.Trp271Ter | ||||||
| cDNA_position | 822 | ||||||
| CDS_position | 813 | ||||||
| Protein_position | 271 | ||||||
| Exon_number | 5/10 | ||||||
| Codon_change | tgG/tgA | ||||||
| Amino_acid_change | W/* | ||||||
| Genetics | Interpolated_map_position | III | -26.841 | ||||
| Method | Substitution_allele |
