WormBase Tree Display for Variation: WBVar00053336
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WBVar00053336 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00053336 | |||
Other_name | pas22264 | ||||
cewivar00059227 | |||||
K02A6.3.1:c.234-144A>T | |||||
HGVSg | CHROMOSOME_X:g.8231116T>A | ||||
Sequence_details | SMap | S_parent | Sequence | K02A6 | |
Flanking_sequences | aacgatttgttgggcaccagtaaaatgtgagttttacttttcataatattcagagtaatttgcaagtacgcggaaaaactcgtagagattgaagatattgctgactggctcaacgttcaaggttctccaagaacttgtagtgtttgtgatgagatttctaaaagtttagatgtaatgttgaacagtgcggaggcagcatatgagacttttaataaaactgacgtttctactaaacttcgatgaatagaattctcataatcttttgggcaggttgtgccgttaattgtaatagtttttttt | aaagaaactggaagtggaaatatatgaatctcttatcatgagcgggaatctaaaacattgaatttgagaaattcaaaaatcaggaagataagtgcgaactatttttaaaacccccagaaaaaattaagaggggcacgttgaagttttctactaagttttttaatgcaaaaaggtctgaatagctaatctattcacaaaccaaatccctaatttccttctgtaatttatttaagtatgtgatacttttcaacttttaatgaatcttttctcgtctagttttttaagcatcatatcatttta | |||
Mapping_target | K02A6 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (127) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01470068 | |||
Status | Live | ||||
Affects | Gene | WBGene00019294 | |||
Transcript | K02A6.3.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K02A6.3.1:c.234-144A>T | ||||
Intron_number | 3/10 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |