WormBase Tree Display for Variation: WBVar00053283
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WBVar00053283 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00053283 | |||
Other_name | haw41779 | ||||
haw142397 | |||||
cewivar00104863 | |||||
H06I04.6b.2:c.362+77T>G | |||||
H06I04.6b.3:c.362+77T>G | |||||
H06I04.6b.1:c.362+77T>G | |||||
H06I04.6a.3:c.-53+77T>G | |||||
H06I04.6a.1:c.-155+77T>G | |||||
HGVSg | CHROMOSOME_III:g.3063884A>C | ||||
Sequence_details | SMap | S_parent | Sequence | H06I04 | |
Flanking_sequences | gaaatatgggaaattttaaggccta | attttggtagttgagaatttcgaaa | |||
Mapping_target | H06I04 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00562262 | |||
Status | Live | ||||
Affects | Gene | WBGene00019170 | |||
Transcript | H06I04.6b.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6b.2:c.362+77T>G | ||||
Intron_number | 2/6 | ||||
H06I04.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6b.1:c.362+77T>G | ||||
Intron_number | 2/7 | ||||
H06I04.6a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6a.3:c.-53+77T>G | ||||
Intron_number | 1/6 | ||||
H06I04.6b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6b.3:c.362+77T>G | ||||
Intron_number | 2/7 | ||||
H06I04.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6a.1:c.-155+77T>G | ||||
Intron_number | 1/7 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw41779 | ||||
Method | WGS_Hawaiian_Waterston |