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WormBase Tree Display for Variation: WBVar00052938

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Name Class

WBVar00052938NamePublic_nameWBVar00052938
Other_namehaw41710
cewivar00195728
Y55D5A.5d.1:c.5028+557C>A
Y55D5A.5c.1:c.5415+557C>A
Y55D5A.5g.1:c.1647+557C>A
Y55D5A.5e.1:c.4941+557C>A
Y55D5A.5f.1:c.2739+557C>A
Y55D5A.5a.1:c.5169+557C>A
HGVSgCHROMOSOME_III:g.2998105G>T
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesttttaaattttaaattttcaaaaaattttttttgcaacttttatcgaatt
Mapping_targetY55D5A
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5g.1:c.1647+557C>A
Intron_number2/3
Y55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.4941+557C>A
Intron_number13/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.2739+557C>A
Intron_number6/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.5169+557C>A
Intron_number16/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.5415+557C>A
Intron_number18/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.5028+557C>A
Intron_number14/15
Remark[20081124 db] this Variation was previously named hw41710
MethodWGS_Hawaiian_Waterston