WormBase Tree Display for Variation: WBVar00052856
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| WBVar00052856 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00052856 | |||
| Other_name | pas22168 | ||||
| haw105367 | |||||
| cewivar00058911 | |||||
| C34D10.2b.1:c.28+1925A>C | |||||
| C34D10.2a.1:c.-75+1925A>C | |||||
| HGVSg | CHROMOSOME_X:g.8016996A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C34D10 | |
| Flanking_sequences | caagctagtatcctgccttggagtcaacggctcgacactcttcctagcccagtctgcttgaaacaattttttgtgttgaaacaatttttaccccctcctttctttttccatgagctctctgaatgtagaagtagagagatgagaaaggaaaaaaggaaaagaaggagctcattagtttattctgaaaatatcgaatagtcgctagacggaaaagattgtgtttacaacagttattattgaagccgttggttagatttttcaagtctttctcggaaagaattccagaaacttggaaattgg | aaaaacattaaaacttctggcaaatgaatgcaaaattatttgattatccttccatttaaaaatttctgatgtaataaaccaactgagtaaaagtgaatcatttttcgcatgcattaaagccgttcccattttttttttcgattttattcgcatgtttttctgttattcttctttctcgaggatttttcctcaaaccacttgccataaaaatggagtttctcaaatattttccgttcgttgtgctgcttctacctgtttttatgttcactgactgcctttgtgcttgctcgaaaaaaccaa | |||
| Mapping_target | C34D10 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (168) | |||||
| Laboratory | QX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01469941 | |||
| WBVar00081007 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016407 | |||
| Transcript | C34D10.2b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C34D10.2b.1:c.28+1925A>C | ||||
| Intron_number | 1/15 | ||||
| C34D10.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C34D10.2a.1:c.-75+1925A>C | ||||
| Intron_number | 1/16 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
