WormBase Tree Display for Variation: WBVar00052676
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| WBVar00052676 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00052676 | |||
| Other_name | pas22132 | ||||
| cewivar00059025 | |||||
| C02B8.12.1:c.81+182C>T | |||||
| HGVSg | CHROMOSOME_X:g.8122958G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C02B8 | |
| Flanking_sequences | attactgatattttacttgattataataattgatggtaataataataagggtacttacaattgatttataaataccaatgttgaaatagttttatttgttcttttattatccaaagttgggcatcaatccacttaatcagatgttaatttaaaaataaaataatttattgaaaatttgagattttagctaacgaagttagcccttctgttgcaaaatttttgaatatcgttacataattgtgaacactttaagaattcatattatgaagttcggtcttgtgggcttagattgagtgtttt | gaacaataaaaactatttctctattccatgtgttttatacgactggcgtaacatatagggatcctaaatatttattcactcttttttcagttatagctgatggatatcaaaaagattttcgaaaccctcaaaacagtttaaagtgtgaagtttgcctgcgtttactttttcgatgactcaccttggtcacaatagcggagttgcgactattaaataacagacagagtgaaaaataagtcgctaataatgaccagttgctcattatctttgatgagtattgatttcttagttttcaaactg | |||
| Mapping_target | C02B8 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (114) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01470015 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00219375 | |||
| Transcript | C02B8.12.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C02B8.12.1:c.81+182C>T | ||||
| Intron_number | 2/9 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
