WormBase Tree Display for Variation: WBVar00050711

WBVar00050711 Name: Public_name: WBVar00050711
    Other_name: pas21739
      cewivar00058555
      C47C12.6c.1:c.1106-22T>C
      C47C12.6f.1:c.1075+166T>C
      C47C12.6d.1:c.1105+166T>C
      C47C12.6g.1:c.1016-22T>C
      C47C12.6b.1:c.1106-22T>C
      C47C12.6e.1:c.1076-22T>C
      C47C12.6a.2:c.1076-22T>C
      C47C12.6a.1:c.1076-22T>C
    HGVSg: CHROMOSOME_X:g.7765925T>C
  Sequence_details: SMap: S_parent: Sequence: C47C12
    Flanking_sequences: taagttattgctttcagactccctattgcattggtaaagccggtgtgggtaaaattgaaattcgaaaactttggcttgaaaacaatatgacaacaacatcaacaactactacaacaaccacaaccccaccaccaagtaaggtcgtttgatagactattcaaaaaacttatagtctttgtttttaattcacataacagcatttacatttgctattacatttgttaaataatatttgcatggttattataaattcactcactcagctagtcataagattaccacaaaagctgcacgtttcta catttttggcacttcttacagcaacgacctccacaactacaactaccacaacgacacctcctcccacgaccactggtaagttgtgatagtttacaaaaataaattaggcttgcactttttgtacattttgcatagcttttccacttctctaactttaccagtttctacttctacttctaccacttcaaccacaactacgactactacaacgacaacaccacgacctacaacaacagaaaaaactactactaccccaagaccaacgacttcaacaacttcaacaaccactacaacacatcc
    Mapping_target: C47C12
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (35)
    Person: WBPerson6900
    Analysis: WGS_Pasadena_Quinlan
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00000950
    Transcript: C47C12.6e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47C12.6e.1:c.1076-22T>C
        Intron_number: 7/16
      C47C12.6c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47C12.6c.1:c.1106-22T>C
        Intron_number: 8/16
      C47C12.6a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47C12.6a.2:c.1076-22T>C
        Intron_number: 7/16
      C47C12.6b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47C12.6b.1:c.1106-22T>C
        Intron_number: 8/17
      C47C12.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47C12.6a.1:c.1076-22T>C
        Intron_number: 8/17
      C47C12.6d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47C12.6d.1:c.1105+166T>C
        Intron_number: 8/15
      C47C12.6f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47C12.6f.1:c.1075+166T>C
        Intron_number: 7/14
      C47C12.6g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C47C12.6g.1:c.1016-22T>C
        Intron_number: 10/18
  Method: WGS_Pasadena_Quinlan