WormBase Tree Display for Variation: WBVar00050491
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WBVar00050491 | Name | Public_name | WBVar00050491 | ||
---|---|---|---|---|---|
Other_name | pas21695 | ||||
cewivar00058481 | |||||
K09F5.6a.1:c.2397+245A>G | |||||
CE53611:p.Gly838= | |||||
K09F5.6b.1:c.2514A>G | |||||
HGVSg | CHROMOSOME_X:g.7724363A>G | ||||
Sequence_details | SMap | S_parent | Sequence | K09F5 | |
Flanking_sequences | ggcaaccaggtcaattgctatggaaccctccaggagctacaaacggacacaataaggttattttatctatttgagttgttgtattcgagcttttctctcattatttcaattttttgcacgatgagttatttattcattcacattttcggcacacatctcattctaacatccacatccattgcagtcatcgctaaccagcacaacaaattcatctcaaaacgatgagcaatgctttaccccgacttcaacactaacaagtcacggaagtaactacactccaacacctggatctccacaagg | tccaatccgatctattcccgaatcaatggagcatcttccacatcgtcaaatctttacggagttgcttccaaagaaagtcaatatgctgacaggacacttcaaaaagcaccgatcaaatctacaacagtgacgactggaaatacaatacttcgttccgtgaacggaacagatgacactgtatcaagcttttctcgtccacccactggagcacttaaccaaaatgactttgctaccagcattgtgtgaatatttgttttacatttttggtaggtcttaattcaaaagtaactagaaatgttt | |||
Mapping_target | K09F5 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (27) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00044698 | |||
Transcript | K09F5.6b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | K09F5.6b.1:c.2514A>G | ||||
HGVSp | CE53611:p.Gly838= | ||||
cDNA_position | 2650 | ||||
CDS_position | 2514 | ||||
Protein_position | 838 | ||||
Exon_number | 13/15 | ||||
Codon_change | ggA/ggG | ||||
Amino_acid_change | G | ||||
K09F5.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K09F5.6a.1:c.2397+245A>G | ||||
Intron_number | 12/13 | ||||
Method | WGS_Pasadena_Quinlan |