WormBase Tree Display for Variation: WBVar00050481
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| WBVar00050481 | Name | Public_name | WBVar00050481 | ||
|---|---|---|---|---|---|
| Other_name | pas21693 | ||||
| cewivar00058479 | |||||
| K09F5.6b.1:c.1356+12C>G | |||||
| K09F5.6a.1:c.1356+12C>G | |||||
| HGVSg | CHROMOSOME_X:g.7722507C>G | ||||
| Sequence_details | SMap | S_parent | Sequence | K09F5 | |
| Flanking_sequences | tcgacgacgctcctacacaagagtcgatggaaacaagttgtgctgtgatggttatttgccacatatggatgccattgcacttttagtcattgttgctggagcgattggtcctaccatctacgctctgttgattctttatcagcatgaacaaaaagcattaatactgacttgcatcataattgacgtcgtctacatgttttcatggattctgatgtggcttggaatgaccttaaaaagagattgggattttaatgttacgcataaagttcatcagttctatggattgaatgtaagtttgaa | aataaattgatagtgtcaagcagaattattttcagaaaggaatggcaattggaccaattcgtggaaatgaaaatccatctcaactgaaaaactctattcttgttgttcatcgtgatactgtaagtacatattagttcttaaaagtgaaacaagcattatttttttaaagatgtttgtgaccgatgaccaaacagcaaaacaatcgcttcttcgagcaattcacagtggaaagtttgaaatgataagtccacccgatgatgtgtactggaggcaaggtcaacaaagtcctgcaactcgggc | |||
| Mapping_target | K09F5 | ||||
| Type_of_mutation | Substitution | C | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (27) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00044698 | |||
| Transcript | K09F5.6b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K09F5.6b.1:c.1356+12C>G | ||||
| Intron_number | 7/14 | ||||
| K09F5.6a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K09F5.6a.1:c.1356+12C>G | ||||
| Intron_number | 7/13 | ||||
| Method | WGS_Pasadena_Quinlan |
