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WormBase Tree Display for Variation: WBVar00049851

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Name Class

WBVar00049851EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00049851
Other_namepas21567
cewivar00058294
C44E12.3d.1:c.296-371T>A
C44E12.3b.1:c.104-371T>A
C44E12.3e.1:c.296-371T>A
C44E12.3c.1:c.296-371T>A
C44E12.3a.1:c.124+292T>A
C44E12.3g.1:c.104-371T>A
C44E12.3f.1:c.104-371T>A
HGVSgCHROMOSOME_X:g.7603993A>T
Sequence_detailsSMapS_parentSequenceC44E12
Flanking_sequencescattctcttttattcaactaattagatttgtacatcttttcttctaaaggtttcgggaagggctattttggttttttctcaaccaatattgtttcaaaaaaaatattgttgagtgaaaactattactcgtttagtcttgcaccggacactttaactctgacaactcatatctcggttcttataaacatttaacaaaattttaaactgccaatctatatttaaaaaaatatatgaaccagataagacagccaagaaacaaactttgaatggtgaaaaatgtggtgcaaggctgttaaaaaaatagcaaaattgatctacatattcattttaaaaatacatcacttctcaaacaaaaagttaaattggcttaataaaaaacctgaattcaccaaatagttagagaacaacttttttctataagtttttaacctgaaatgtttcagtagaactttgtaacctggatacagtattctgtaaagcggtaaaaaacgtcctatggtattaacacgtttctggaataaccattaacacgcttgctttgaataaaagtttaaacttagtttttggtatctagcgggtattataacttacctttcaatg
Mapping_targetC44E12
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (110)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01469775
StatusLive
AffectsGeneWBGene00006671
TranscriptC44E12.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC44E12.3d.1:c.296-371T>A
Intron_number2/12
C44E12.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC44E12.3b.1:c.104-371T>A
Intron_number1/10
C44E12.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC44E12.3c.1:c.296-371T>A
Intron_number1/11
C44E12.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC44E12.3a.1:c.124+292T>A
Intron_number1/10
C44E12.3f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC44E12.3f.1:c.104-371T>A
Intron_number2/13
C44E12.3g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC44E12.3g.1:c.104-371T>A
Intron_number1/11
C44E12.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC44E12.3e.1:c.296-371T>A
Intron_number1/10
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan