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WormBase Tree Display for Variation: WBVar00047488

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Name Class

WBVar00047488EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00047488
Other_namehaw40620
cewivar00195060
H14E04.2d.1:c.*150T>A
H14E04.2c.1:c.*150T>A
H14E04.2b.1:c.*150T>A
H14E04.2a.1:c.*150T>A
HGVSgCHROMOSOME_III:g.2384720T>A
Sequence_detailsSMapS_parentSequenceH14E04
Flanking_sequencesatttctgtgctgtacccgtccccgtttcttattattatttttagtatcaa
Mapping_targetH14E04
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01327582
WBVar01259442
StatusLive
AffectsGeneWBGene00019199
TranscriptH14E04.2a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScH14E04.2a.1:c.*150T>A
cDNA_position1883
Exon_number12/12
H14E04.2c.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScH14E04.2c.1:c.*150T>A
cDNA_position1904
Exon_number13/13
H14E04.2b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScH14E04.2b.1:c.*150T>A
cDNA_position1894
Exon_number12/12
H14E04.2d.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScH14E04.2d.1:c.*150T>A
cDNA_position1528
Exon_number9/9
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw40620
MethodWGS_Hawaiian_Waterston