WormBase Tree Display for Variation: WBVar00047136
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| WBVar00047136 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00047136 | |||
| Other_name | pas21024 | ||||
| cewivar00057442 | |||||
| CE04172:p.Thr382= | |||||
| C36B7.1.1:c.1146C>T | |||||
| HGVSg | CHROMOSOME_X:g.7114533C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C36B7 | |
| Flanking_sequences | accatttttccgagactatcaaacgctatactataaggcacccgaagttttttgccagggaaaagttagcgtggaaattgacatttggtcattgggatgtgtggcagccgaaatcgtacgtggtaccccgctatttgttggagacaactactttgatcaatttgctttaattcaagaattttttggtaaaccatcacgaaagttgtttaacacttggggaggaattcaccaattttacacggagtacttctttccacgtcattgcttcgaatggcttaatccttttaatggagaccgcac | atggaaatcgaaccgtaagtgactccacttacttcattttaggaacatcaatttgctctattagtttatcattaaaagcaaaaaagaaaataatgtccattttgctgttattaaaacatggaaaattcctttttcagacattacaaactggcacatccgtcgagaaagcctcctttgactagctcactggtaagcaagttgccaggaggaaaccagaaatttttggctagattcctaatgagatgttttgaatgggatccgactgaacgcatcaagtcatcattcattttgaaccacccg | |||
| Mapping_target | C36B7 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (168) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01469631 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00016464 | |||
| Transcript | C36B7.1.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C36B7.1.1:c.1146C>T | ||||
| HGVSp | CE04172:p.Thr382= | ||||
| cDNA_position | 1146 | ||||
| CDS_position | 1146 | ||||
| Protein_position | 382 | ||||
| Exon_number | 4/6 | ||||
| Codon_change | acC/acT | ||||
| Amino_acid_change | T | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
