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WormBase Tree Display for Variation: WBVar00046986

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Name Class

WBVar00046986NamePublic_nameWBVar00046986
Other_namepas20994
haw41882
cewivar00104933
H06I04.1b.1:c.33+1412C>T
H06I04.1a.1:c.33+1412C>T
HGVSgCHROMOSOME_III:g.3093316C>T
Sequence_detailsSMapS_parentSequenceH06I04
Flanking_sequencestttctacaagtttttgctcttaaattcaagttttccatcattttctaccatttttcccagttttttgagattttctgcagttttccgtggaattccgtgtttgcgtattttcaatactacagtaaccctgccaaattttcaaaaatttccgagaattcgaatttctagtggtttgactcacaaaattttgaattctacgccattttttttttggattttccgcaattttgcgtgatattcggtgtttgcaggatctccaaactacagtaccctctacaaattagcaaaaagtacaaaatttatatttttatgtgatttgactcgaaattttgaattcaacacgtcatttttcacctctctttccaaattttccgataaattctgcaatttctcgtgaaattccgtgtttgcgtactttttcggcttaccgtaatcataaaaattaaaattttacgctcattttccaaattttcaatgaaattccagcgttggattcggggtgtttgcgtattactggggctacagtagccaggaagatttaaatttttcgttattttgaaaataaattcactttgttgttaaatcgattcaaaacccaga
Mapping_targetH06I04
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (101)
LaboratoryQX
AX
RW
PersonWBPerson6900
WBPerson1730
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WGS_Andersen
HistoryAcquires_mergeWBVar00053798
WBVar01444768
WBVar01261177
WBVar01329703
StatusLive
AffectsGeneWBGene00019167
TranscriptH06I04.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.1a.1:c.33+1412C>T
Intron_number1/6
H06I04.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.1b.1:c.33+1412C>T
Intron_number1/5
ReferenceWBPaper00040707
WBPaper00037807
MethodWGS_Pasadena_Quinlan