WormBase Tree Display for Variation: WBVar00046861
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| WBVar00046861 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00046861 | |||
| Other_name | pas20969 | ||||
| cewivar00104904 | |||||
| H06I04.3c.1:c.2148-24A>T | |||||
| H06I04.3a.1:c.2148-24A>T | |||||
| HGVSg | CHROMOSOME_III:g.3083470A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | H06I04 | |
| Flanking_sequences | aaaaaaaaagccttaaaatagcctctctatcatttttttccgtgacttgtgtgcttctactcttattgattgcagtaaaaacgggtatttattcacatttttagccttaaatttgctgaaaatgtgaataaataccgtatttctgcaaacaatttgacaatagagcacatttgtcactcggagatgcggaagctatgcacaaattttcaatttttacttttacaaaaacttgtaattttcacgttgatttagtgttaaaatgcattttttagccaatattggggttttaaattgaaaaaa | tcgctaattttgccgtttttcaggatgcaacgtaagctggaatcggcaaagaaaaaagctgaaggaattcttgaaaatgatcaaatggagcactcggaaaaggttcgagaaatgaagaaagtgtatgcaaatgcgacgagaaaggagaaaaagaaggttgaattagttcgaatgacgaaaggaaagaagggaaaaactggacgaccaaatggacaatataagcttgtcgataggtaaaatttggagaaaatttgaagaaaaagctgaaaaattgagaaattttggttaaaaacctcctaa | |||
| Mapping_target | H06I04 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (25) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01444755 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00019168 | |||
| Transcript | H06I04.3a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06I04.3a.1:c.2148-24A>T | ||||
| Intron_number | 9/11 | ||||
| H06I04.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06I04.3c.1:c.2148-24A>T | ||||
| Intron_number | 8/9 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
