WormBase Tree Display for Variation: WBVar00043531
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| WBVar00043531 | Name | Public_name | WBVar00043531 | ||
|---|---|---|---|---|---|
| Other_name | pas20303 | ||||
| haw116562 | |||||
| cewivar00000935 | |||||
| F55C7.7i.1:c.21+27G>A | |||||
| F55C7.7i.2:c.21+27G>A | |||||
| F55C7.7b.1:c.21+27G>A | |||||
| F55C7.7a.1:c.21+27G>A | |||||
| HGVSg | CHROMOSOME_I:g.4031580C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C09D1 | |
| Flanking_sequences | aatcaactaaactacagtaatctttaaaggctcatcaaaaatttgtagtatcgagaccgaataccgtatttttattgcaaatatcgcaaaactttgcgtctgggcaatattaacaaaacaaaattaaattatttgaaatttaaaaatttgatgaaaaagacatttctcggaacattcgaaaaacaaaaacgtattcttttctctatcaaatcgtacagtttgcactcgttttccgcattaatcgcttcaatggattacggcgccggcatctctgcctcttttttcacaagttgccgctgc | gccaccatgaaactgaaaaaactcacttttccatcataatcgcccataactgatggaggaattttatgcgaatttgacgactcttcttgaattcaaaataatcatgtgcttctgaatgtctgtgtgtgtattgtgacgatcagatgagaacccgtttatctgaaaaaatgacagttttcaaagaattttaaatttctttcaaaaaaagagatttgagaaaataaaatagagtgcgtattgaaaagagagaaaaagttgattttcgatttaaattttctgatgaaatattgctcgaaaatc | |||
| Mapping_target | C09D1 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (171) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01421912 | |||
| WBVar00536427 | |||||
| WBVar01431277 | |||||
| WBVar01343186 | |||||
| WBVar01281337 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006805 | |||
| Transcript | F55C7.7i.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55C7.7i.1:c.21+27G>A | ||||
| Intron_number | 1/25 | ||||
| F55C7.7b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55C7.7b.1:c.21+27G>A | ||||
| Intron_number | 1/20 | ||||
| F55C7.7a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55C7.7a.1:c.21+27G>A | ||||
| Intron_number | 2/33 | ||||
| F55C7.7i.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F55C7.7i.2:c.21+27G>A | ||||
| Intron_number | 1/24 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
