WormBase Tree Display for Variation: WBVar00041069
expand all nodes | collapse all nodes | view schema
WBVar00041069 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00041069 | ||||
Other_name | cbs30919 | |||||
cb30919 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc3857a | ||
Flanking_sequences | tttatttcaaacgttatgcctctct | tcttttcatgatatgccttctgaag | ||||
Mapping_target | cb25.fpc3857a | |||||
Type_of_mutation | Substitution | A | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | GTNAC | MaeIII | 723 158 119 | ||
AATT | Sse9I, TasI, Tsp509I, TspEI | 251 183 119 114 98 88 84 39 14 10 | ||||
Polymorphic_strain_digest | GTNAC | MaeIII | 723 277 | |||
AATT | Sse9I, TasI, Tsp509I, TspEI | 251 156 119 114 98 88 84 39 27 14 10 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |