WormBase Tree Display for Variation: WBVar00040328
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WBVar00040328 | Name | Public_name | WBVar00040328 | ||
---|---|---|---|---|---|
Other_name | haw39188 | ||||
cewivar00021167 | |||||
Y22D7AL.8c.1:c.310+159T>A | |||||
Y22D7AL.8a.4:c.250+159T>A | |||||
Y22D7AL.8a.3:c.250+159T>A | |||||
Y22D7AL.8b.1:c.505+159T>A | |||||
Y22D7AL.8d.1:c.352+159T>A | |||||
Y22D7AL.8a.1:c.250+159T>A | |||||
Y22D7AL.8a.5:c.250+159T>A | |||||
Y22D7AL.8a.2:c.250+159T>A | |||||
HGVSg | CHROMOSOME_III:g.1588994A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y22D7AL | |
Flanking_sequences | aaaatattgtaatttttaaaaaatg | atgaaaacacacagaattcttacca | |||
Mapping_target | Y22D7AL | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (153) | |||||
Laboratory | RW | ||||
QX | |||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01443785 | |||
WBVar01325063 | |||||
WBVar01257582 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004894 | |||
Transcript | Y22D7AL.8a.4 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y22D7AL.8a.4:c.250+159T>A | ||||
Intron_number | 3/7 | ||||
Y22D7AL.8d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y22D7AL.8d.1:c.352+159T>A | ||||
Intron_number | 2/5 | ||||
Y22D7AL.8a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y22D7AL.8a.3:c.250+159T>A | ||||
Intron_number | 3/7 | ||||
Y22D7AL.8b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y22D7AL.8b.1:c.505+159T>A | ||||
Intron_number | 3/6 | ||||
Y22D7AL.8c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y22D7AL.8c.1:c.310+159T>A | ||||
Intron_number | 2/5 | ||||
Y22D7AL.8a.5 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y22D7AL.8a.5:c.250+159T>A | ||||
Intron_number | 2/6 | ||||
Y22D7AL.8a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y22D7AL.8a.2:c.250+159T>A | ||||
Intron_number | 3/7 | ||||
Y22D7AL.8a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y22D7AL.8a.1:c.250+159T>A | ||||
Intron_number | 4/8 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw39188 | ||||
Method | WGS_Hawaiian_Waterston |