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WormBase Tree Display for Variation: WBVar00040328

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Name Class

WBVar00040328NamePublic_nameWBVar00040328
Other_namehaw39188
cewivar00021167
Y22D7AL.8c.1:c.310+159T>A
Y22D7AL.8a.4:c.250+159T>A
Y22D7AL.8a.3:c.250+159T>A
Y22D7AL.8b.1:c.505+159T>A
Y22D7AL.8d.1:c.352+159T>A
Y22D7AL.8a.1:c.250+159T>A
Y22D7AL.8a.5:c.250+159T>A
Y22D7AL.8a.2:c.250+159T>A
HGVSgCHROMOSOME_III:g.1588994A>T
Sequence_detailsSMapS_parentSequenceY22D7AL
Flanking_sequencesaaaatattgtaatttttaaaaaatgatgaaaacacacagaattcttacca
Mapping_targetY22D7AL
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (153)
LaboratoryRW
QX
AX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01443785
WBVar01325063
WBVar01257582
StatusLive
AffectsGeneWBGene00004894
TranscriptY22D7AL.8a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY22D7AL.8a.4:c.250+159T>A
Intron_number3/7
Y22D7AL.8d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY22D7AL.8d.1:c.352+159T>A
Intron_number2/5
Y22D7AL.8a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY22D7AL.8a.3:c.250+159T>A
Intron_number3/7
Y22D7AL.8b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY22D7AL.8b.1:c.505+159T>A
Intron_number3/6
Y22D7AL.8c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY22D7AL.8c.1:c.310+159T>A
Intron_number2/5
Y22D7AL.8a.5VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY22D7AL.8a.5:c.250+159T>A
Intron_number2/6
Y22D7AL.8a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY22D7AL.8a.2:c.250+159T>A
Intron_number3/7
Y22D7AL.8a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY22D7AL.8a.1:c.250+159T>A
Intron_number4/8
ReferenceWBPaper00040707
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw39188
MethodWGS_Hawaiian_Waterston