WormBase Tree Display for Variation: WBVar00040206
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| WBVar00040206 | Name | Public_name | WBVar00040206 | ||
|---|---|---|---|---|---|
| Other_name | pas19638 | ||||
| cewivar00081225 | |||||
| CE44962:p.Ala659= | |||||
| T07H3.1.1:c.1977G>C | |||||
| HGVSg | CHROMOSOME_II:g.1604442G>C | ||||
| Sequence_details | SMap | S_parent | Sequence | T07H3 | |
| Flanking_sequences | gatctatacaagctcttagaccctctaagatcttcaagtttctcagttccagatcctcatctccaactccgccagattcaagaacataatcagcaagatcaacttcaccgcagcaccgagcaccgagatcaagctccccgactcgagtgccgatcacttccagaacttcctggaagcctgctacggagacccctcaattaatggtaacgttcaaggttctacagattcttaacaaaattgaacattttcagacgacactgtccatggaattctgaaaattgcgcaaagctatgaagccgc | ggaattgtgaagcggtgtgaagagtatgtaataaagtactccaagaaaacgctggagcagaaggagaagctggcgaagcatcataatttgaagactctaaaggcacattgtgattattggaaaagtcgccggaaatgctgctagatttgtacggaaattaataaaaatgttttattagaggttgtactgcacagaattttacaggtacatatgtagatcatagatcaaatttccagattggaatagcaagatctcttcaagttctccaagttatagcgataggccagctgcagctgtttc | |||
| Mapping_target | T07H3 | ||||
| Type_of_mutation | Substitution | G | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (70) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01295512 | |||
| WBVar01436087 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006464 | |||
| Transcript | T07H3.1.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T07H3.1.1:c.1977G>C | ||||
| HGVSp | CE44962:p.Ala659= | ||||
| cDNA_position | 1998 | ||||
| CDS_position | 1977 | ||||
| Protein_position | 659 | ||||
| Exon_number | 9/10 | ||||
| Codon_change | gcG/gcC | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
