WormBase Tree Display for Variation: WBVar00039616
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| WBVar00039616 | Name | Public_name | WBVar00039616 | ||
|---|---|---|---|---|---|
| Other_name | pas19520 | ||||
| cewivar00080818 | |||||
| K05F6.10.1:c.105-27T>C | |||||
| HGVSg | CHROMOSOME_II:g.1575983A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | T07H3 | |
| Flanking_sequences | accagtgatgttcactcgaacttcaaccttcaagcatccatcagccaaaaaatccacaacagatccccatttgaaaatgtcttttccttggctacagtaccccgctgacggctcgaacactgcgtcattcagtcttgcagtcatccgattgtcactgcccgagctgataatcatgtcgagatctgcttgaagcttgcgactctcctgaccagatcttcgtctcgagcacattccgactttgaaatcgtcattgcaacgtgtgatttgaattctcctaaaaacattgtttcagattacttt | gactgactacggactaaagtagactcaccaccaacagttcaaataattttccttctcactgtgcagtttgtcattgggcttcatacgatcaacattttcaaaaatgtgctccattttgaattctccacccatgattaaagcttcaaaagaggcaaagttggcgtttgcgattaaaaaaaaaaaaaccaagaaaaaagcttgagcaatcaaaagtcgacaatttcttattttttcccaattttttttcggccatctaattactgcctttttttttgggcaaaaaaaaataatttttctaaa | |||
| Mapping_target | T07H3 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (70) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01295269 | |||
| WBVar01436072 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019421 | |||
| Transcript | K05F6.10.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K05F6.10.1:c.105-27T>C | ||||
| Intron_number | 2/6 | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
