WormBase Tree Display for Variation: WBVar00036111
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| WBVar00036111 | Name | Public_name | WBVar00036111 | ||
|---|---|---|---|---|---|
| Other_name | pas18819 | ||||
| cewivar00078936 | |||||
| T23F4.4.1:c.239-134T>C | |||||
| HGVSg | CHROMOSOME_II:g.1178536A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | T23F4 | |
| Flanking_sequences | caacgactgctcgcggagacttggctgctttccaacaaaactccagcatccatttccttcgaatatgctcacatgggggtatacatatcgattttcatggaatgttacacatgttttttcactccaaaattgcatggcttcaaggactcgctgtcgggaacgggaggctggaatacggtggggttactgtagatggagctacttaaaagctactgtagcttgaccaaatgaggatttctgtaatttgacccactaatgaggtactgaagttttaacctacttcaggaatactgtagtttg | ccttctaaacgattactgtagtttgactaacttaggacttactgtagtttgacctacttgtgggttactgtaactatacttaagtatacctgcggttactgtaggttgacctacttaggggatactgtagtttgatattcataagggttactgtagctagatctaagtaaagctacggttacagtagtttgacctacttaggggatactgtagattgacctaatttccataaaccttactgcactttgacctactatctaaaaatataaattactgtagtttgatctatttttctcgcgt | |||
| Mapping_target | T23F4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003545 | |||
| Transcript | T23F4.4.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T23F4.4.1:c.239-134T>C | ||||
| Intron_number | 3/9 | ||||
| Method | WGS_Pasadena_Quinlan |
