WormBase Tree Display for Variation: WBVar00035141
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| WBVar00035141 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00035141 | |||
| Other_name | pas18625 | ||||
| cewivar00057162 | |||||
| F41C6.4a.1:c.847T>C | |||||
| CE42795:p.Ser283Pro | |||||
| CE41806:p.Ser283Pro | |||||
| F41C6.4b.1:c.847T>C | |||||
| HGVSg | CHROMOSOME_X:g.6873885A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F41C6 | |
| Flanking_sequences | gataagatttagatggattttcgataagagaatggcttaattcgtgtccaacaacgtaaccggccagtccgagctattagaaacaaaattaattcaatgataaatttaaaaacacgctcacattagcagccatttctgaattcgcggcacgtgcgatgaaaggcataccaaaataaatatatggatgtctatttgttgcatcgtagccgaaatgaagaacagttgttgttctaccattaaacataaaatggtaactatatattgaacaaaacaagtcatgttttcctgaaaaatccgcag | gcatttcaaaaagtcttgctcggttttcataagcgcatctatattctctctcagttgaattccatattcatcaatcacgaataagtcccttgcaactgcttcaagcgctctgttaattttctgatcattaacccaaggtgtttcctgcaaaatcaattcaaacggatttttggcaatatatttatacacctgaatccattgcaaaagcacatcaaccatattcatcaagaaactgttaatattatcaactccgactttgaagttgccatccaaaaggatatttacggctctggttttgtt | |||
| Mapping_target | F41C6 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (115) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01469516 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00018278 | |||
| Transcript | F41C6.4b.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | F41C6.4b.1:c.847T>C | ||||
| HGVSp | CE42795:p.Ser283Pro | ||||
| cDNA_position | 847 | ||||
| CDS_position | 847 | ||||
| Protein_position | 283 | ||||
| Exon_number | 3/5 | ||||
| Codon_change | Tct/Cct | ||||
| Amino_acid_change | S/P | ||||
| F41C6.4a.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | F41C6.4a.1:c.847T>C | ||||
| HGVSp | CE41806:p.Ser283Pro | ||||
| cDNA_position | 855 | ||||
| CDS_position | 847 | ||||
| Protein_position | 283 | ||||
| Exon_number | 4/4 | ||||
| Codon_change | Tct/Cct | ||||
| Amino_acid_change | S/P | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
