WormBase Tree Display for Variation: WBVar00034923
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WBVar00034923 | Name | Public_name | WBVar00034923 | ||
---|---|---|---|---|---|
Other_name | haw38107 | ||||
haw139938 | |||||
cewivar00019568 | |||||
BE0003N10.6a.1:c.807+185G>A | |||||
BE0003N10.6b.1:c.489+185G>A | |||||
BE0003N10.6c.1:c.414+185G>A | |||||
BE0003N10.6d.1:c.168+185G>A | |||||
HGVSg | CHROMOSOME_III:g.1057545C>T | ||||
Sequence_details | SMap | S_parent | Sequence | BE0003N10 | |
Flanking_sequences | tactgattgtcgatttttaaagaat | ttgtgctgaaatcgtgaaaatcggt | |||
Mapping_target | BE0003N10 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (105) | |||||
Laboratory | RW | ||||
QX | |||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01390484 | |||
WBVar01443441 | |||||
WBVar00559803 | |||||
WBVar01323476 | |||||
Status | Live | ||||
Affects | Gene | WBGene00255598 | |||
Transcript | BE0003N10.6a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | BE0003N10.6a.1:c.807+185G>A | ||||
Intron_number | 5/6 | ||||
BE0003N10.6d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | BE0003N10.6d.1:c.168+185G>A | ||||
Intron_number | 1/1 | ||||
BE0003N10.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | BE0003N10.6b.1:c.489+185G>A | ||||
Intron_number | 3/3 | ||||
BE0003N10.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | BE0003N10.6c.1:c.414+185G>A | ||||
Intron_number | 2/2 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw38107 | ||||
Method | WGS_Hawaiian_Waterston |