WormBase Tree Display for Variation: WBVar00034211
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WBVar00034211 | Name | Public_name | WBVar00034211 | ||
---|---|---|---|---|---|
Other_name | pas18439 | ||||
haw104361 | |||||
cewivar00056899 | |||||
C25B8.4b.1:c.178+19T>C | |||||
C25B8.4a.1:c.70+19T>C | |||||
C25B8.4c.1:c.70+19T>C | |||||
HGVSg | CHROMOSOME_X:g.6618633A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C25B8 | |
Flanking_sequences | gaacccatccgtccgggcatgttccagtctgaaaatagaatagcatttacgggcctagttggaacgaaaaactatcttactggaaaatcgtggtagtgttgacgttggtcaagggaaatatcagtgaaggcgttggttccaaaatccttgtagctccagttgaagagtttgactgaaaactttcaattgtaagtttcatatagcaatacattgcaaccttcttcaatttgtgagaatgatgttaattttttgaaaaagttttggtgctgttcgatagacaatgtcgaaacattgagaagt | tttccaaaataatcttaccttgagcaaaccgagttgatacaaatcccacggcagctacgagtagaacgagtttgaagattctgaaataacttttagttacatagaatttttcaaatgaactttggtaaatcgtaactgttaaacaaagaactgatttggaatcaagtgaaacggggggtatatttaatttcgtcattaccctaaagcacttcaaaagtttcgagtgttttattgacataatcatagatattgatgggttggctactcgtcattgttattgtcttaggaacgcgctttata | |||
Mapping_target | C25B8 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (27) | |||||
Laboratory | RW | ||||
Person | WBPerson6900 | ||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge | WBVar00080001 | |||
Status | Live | ||||
Affects | Gene | WBGene00016088 | |||
Transcript | C25B8.4b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C25B8.4b.1:c.178+19T>C | ||||
Intron_number | 2/6 | ||||
C25B8.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C25B8.4c.1:c.70+19T>C | ||||
Intron_number | 3/6 | ||||
C25B8.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C25B8.4a.1:c.70+19T>C | ||||
Intron_number | 3/7 | ||||
Method | WGS_Pasadena_Quinlan |