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WormBase Tree Display for Variation: WBVar00034211

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Name Class

WBVar00034211NamePublic_nameWBVar00034211
Other_namepas18439
haw104361
cewivar00056899
C25B8.4b.1:c.178+19T>C
C25B8.4a.1:c.70+19T>C
C25B8.4c.1:c.70+19T>C
HGVSgCHROMOSOME_X:g.6618633A>G
Sequence_detailsSMapS_parentSequenceC25B8
Flanking_sequencesgaacccatccgtccgggcatgttccagtctgaaaatagaatagcatttacgggcctagttggaacgaaaaactatcttactggaaaatcgtggtagtgttgacgttggtcaagggaaatatcagtgaaggcgttggttccaaaatccttgtagctccagttgaagagtttgactgaaaactttcaattgtaagtttcatatagcaatacattgcaaccttcttcaatttgtgagaatgatgttaattttttgaaaaagttttggtgctgttcgatagacaatgtcgaaacattgagaagttttccaaaataatcttaccttgagcaaaccgagttgatacaaatcccacggcagctacgagtagaacgagtttgaagattctgaaataacttttagttacatagaatttttcaaatgaactttggtaaatcgtaactgttaaacaaagaactgatttggaatcaagtgaaacggggggtatatttaatttcgtcattaccctaaagcacttcaaaagtttcgagtgttttattgacataatcatagatattgatgggttggctactcgtcattgttattgtcttaggaacgcgctttata
Mapping_targetC25B8
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (27)
LaboratoryRW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00080001
StatusLive
AffectsGeneWBGene00016088
TranscriptC25B8.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC25B8.4b.1:c.178+19T>C
Intron_number2/6
C25B8.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC25B8.4c.1:c.70+19T>C
Intron_number3/6
C25B8.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC25B8.4a.1:c.70+19T>C
Intron_number3/7
MethodWGS_Pasadena_Quinlan