WormBase Tree Display for Variation: WBVar00033636
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| WBVar00033636 | Name | Public_name | WBVar00033636 | ||
|---|---|---|---|---|---|
| Other_name | pas18324 | ||||
| cewivar00104575 | |||||
| Y55D5A.3.1:c.369C>T | |||||
| CE27498:p.Thr123= | |||||
| HGVSg | CHROMOSOME_III:g.2972166G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y55D5A | |
| Flanking_sequences | ccattaaaatgttatcgatgtaggcgccagagtctgtgaaattccaaaggtaggtacagtaccccaactacagtatcctattcaaaacttacaccttgcattcaagctgacactgtattcaccaggccgctgtcctgtaagtactccattatacagggcaaatgtgagtccggagtactgtatggtcccgtttctaacaaaatccacgtggattgtgatattcttcagaagctcggtcatatcgtagtccaagtttcgaccgtgaataatttgacccgcagagttttgagcaacaattga | gtgcatccgaggccaaaaatgctgaaaattgaaaaagtgcacagtaccccaatcctacagtacccccactcatacagtaattctacaagttcttttttcctctgcagtgcatctctacaacacccctacagtaccccctacttgtacagtaccccatacagtaccccaacaggatcggttttgtaccatacactacttctacagtaacactagataacataacagtacccctacagtacccctacaaggtcgaaacagtactactacagtaccccaacagaaccttacagttccctatcg | |||
| Mapping_target | Y55D5A | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021917 | |||
| Transcript | Y55D5A.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y55D5A.3.1:c.369C>T | ||||
| HGVSp | CE27498:p.Thr123= | ||||
| cDNA_position | 373 | ||||
| CDS_position | 369 | ||||
| Protein_position | 123 | ||||
| Exon_number | 5/8 | ||||
| Codon_change | acC/acT | ||||
| Amino_acid_change | T | ||||
| Method | WGS_Pasadena_Quinlan |
