WormBase Tree Display for Variation: WBVar00032176
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| WBVar00032176 | Name | Public_name | WBVar00032176 | ||
|---|---|---|---|---|---|
| Other_name | pas18032 | ||||
| cewivar00104257 | |||||
| Y71H2AM.1.1:c.699C>T | |||||
| CE37451:p.Phe233= | |||||
| HGVSg | CHROMOSOME_III:g.2830940C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y71H2AM | |
| Flanking_sequences | ctattcgatttttttgcaggtaatctcatatacgaagaaaagataccgaatctttggtgaaacaatcgatattgccgtcggaaactgtttggatcgatttgcccgtgttctcaagctcccgaatgcaccatctccgggatataacattgagcagcttgcgaaaaacggaaaaaagcttatggaactaccgtattctgtgaaaggaatggatgtttcactctcaggaattctgtcacttatcgagaaaaaagcgccaaaactcatcgaatctggggattttacaccggaagacttgtgttt | tcacttcaagagaccgtttttgcaatgcttattgagattaccgaaagagcaatggctcatacgtcgagcaaggagttgctcattgttggcggggttggatgtaatctgagattgcaggtagagataatgataacttgaatttatttcaatttctgaattctacgcatcgagagctttaaaattgcacaaagttgggttctgccaagaaaatcgcaaggttactgtagttttcgtggctagacccaaagtgggcggagatttcccccatcgaggatgtttttttgaattttcaaattcagc | |||
| Mapping_target | Y71H2AM | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (76) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01329056 | |||
| WBVar01444611 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022166 | |||
| Transcript | Y71H2AM.1.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y71H2AM.1.1:c.699C>T | ||||
| HGVSp | CE37451:p.Phe233= | ||||
| cDNA_position | 913 | ||||
| CDS_position | 699 | ||||
| Protein_position | 233 | ||||
| Exon_number | 5/8 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
