WormBase Tree Display for Variation: WBVar00030351
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| WBVar00030351 | Name | Public_name | WBVar00030351 | ||
|---|---|---|---|---|---|
| Other_name | pas17667 | ||||
| haw4911 | |||||
| cewivar00072327 | |||||
| CE27284:p.Gln95Pro | |||||
| Y54E10BR.1b.1:c.-636T>G | |||||
| Y54E10BR.8.1:c.284A>C | |||||
| HGVSg | CHROMOSOME_I:g.3058678T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y54E10BR | |
| Flanking_sequences | tcgattttccatgaaccttctatattctcatcatcatccagaactccaaaatcgtcttcatcaggccctcggtgatccacaatttcctgaaaaactagaaaataaaaaaaaaagtttaaatttatttttttgaaactaacatcatattggctaccctccggcggtaataatatcatttgtgcggtgccttgctgcatctgaaaatttaaaaaaaatcgattttattcggaaatcaattcaaattctgcaaattttcgaaccatcggctgtagaactgtcatctgtgtgctcgaatcttgt | gcgaagtttcatcgatttcaattgcaatcgaatcggcaaccattttccggaaacgcttctcatcctccaggtttcgcttgaattctacgatctgaaagcaaaaaaaaaattaaatttcgtggaaaactccagttttaagttatttttaaacttacagccacatccgaatgattctgagcgaaatgatccattaaactaatcgcactgagtgccggaaaatcacaatatgcacatttaaacggaaaagcttgcaaatgccggctccaaatgtgactttccaagtgctccatagtttctaaa | |||
| Mapping_target | Y54E10BR | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (63) | |||||
| Laboratory | QX | ||||
| AX | |||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00151661 | |||
| WBVar01341695 | |||||
| WBVar01430904 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021840 | |||
| WBGene00021846 | |||||
| Transcript | Y54E10BR.8.1 (12) | ||||
| Y54E10BR.1b.1 | VEP_consequence | 5_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y54E10BR.1b.1:c.-636T>G | ||||
| cDNA_position | 985 | ||||
| Exon_number | 1/15 | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
