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WormBase Tree Display for Variation: WBVar00029564

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Name Class

WBVar00029564EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00029564
Other_namecbs24972
cb24972Paper_evidenceWBPaper00055507
HGVSgchrX:g.9401972T>G
Sequence_detailsSMapS_parentSequencecb25.fpc3857a
Flanking_sequencesggcctcttttcgaaaccggcaaaaacttaaaaacaaggaattttcaaaaa
Mapping_targetcb25.fpc3857a
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (20)
Polymorphic_strain_digest (20)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00034910
TranscriptCBG14389.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG14389.1:c.147+376A>C
Intron_number2/8
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v1.0, ssaha-SNP v2.0
This SNP was observed in 2 sequencing read(s)
MethodSNP