WormBase Tree Display for Variation: WBVar00029441
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| WBVar00029441 | Name | Public_name | WBVar00029441 | ||
|---|---|---|---|---|---|
| Other_name | pas17485 | ||||
| cewivar00103502 | |||||
| E02H9.2:n.109+22A>T | |||||
| HGVSg | CHROMOSOME_III:g.2465543A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | E02H9 | |
| Flanking_sequences | tttggtcttattttctcaatatttatttcctatcacaaagcgttttcagttacgactctcttgtgcagcattctttcgaaaaccgcgaatcacaaaaatttcataccaaaagtttgatttcacttttaagataagaaaaactatactttttttgccaaattttcatgtattgattttataatttctgtcgtagttgacctcagattcgcttacgttttttgctatcaatcgatgcgtgtacgcggatagtggatcattcattattttatttgggttgaggtaacaaaatttttctcatta | aatttttgctgctcaaaattctgatatcattttaaaatacactttcgcaaaaatataaaggaatataaatcaaactctaacaattgtagaactctttaatatttttcagccctcataacaaaaaatatactgtactcgaaagtgaattacaccgtaacaatgttcatcttggcgacttcttaatgcctgcttgattaatgaaacaacattgaagttattccaaaaatgctctcatcctaatgatgagaacgttagtgtcgtacaaaactacgcatatgtaagttgatttttctgcgagaa | |||
| Mapping_target | E02H9 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00017100 | |||
| Pseudogene | E02H9.2 | VEP_consequence | intron_variant,non_coding_transcript_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | E02H9.2:n.109+22A>T | ||||
| Intron_number | 1/4 | ||||
| Method | WGS_Pasadena_Quinlan |
