WormBase Tree Display for Variation: WBVar00025929

WBVar00025929 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00025929
    Other_name: cbs22520
      cb22520 Paper_evidence: WBPaper00055507
    HGVSg: chrV:g.13711907G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4126
    Flanking_sequences: gtgaattgtctgcatagatcatagg ctctgaatctgcattccattcatct
    Mapping_target: cb25.fpc4126
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (14)
      Polymorphic_strain_digest (14)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00038584
    Transcript: CBG19343.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG19343.1:c.384C>T
        HGVSp: CBP11147.1:p.Ser128%3D
        cDNA_position: 401
        CDS_position: 384
        Protein_position: 128
        Exon_number: 4/6
        Codon_change: agC/agT
        Amino_acid_change: S
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP