WormBase Tree Display for Variation: WBVar00024426
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WBVar00024426 | Name | Public_name | WBVar00024426 | ||
---|---|---|---|---|---|
Other_name | pas16482 | ||||
haw3925 | |||||
cewivar00072013 | |||||
Y23H5B.4.1:c.61-2215C>T | |||||
HGVSg | CHROMOSOME_I:g.2535596C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y23H5B | |
Flanking_sequences | ctttgacggtctaggaattgaactttggaatgagaaaaccttgctattttggaatatctgttaaattatatagcaattggacagaggaaaccgaagaaaaaagctctaggccgccaggtgtgatttgatggccaagaaatttaaaaaaataatgataattctaggccatcatgcaaatcataggacaggaggtttctttggtgttgctagaattctcccatagtgtaaattacagatttgagttttctaggccacgctggaaaacctaggccatcgaaaaaaggtcatgcggacccgaaa | agccatttaaatattgcaaaaaatagaagagtgacgtttaatgaaaaaaaaactaagaagatgttctcttttttcgtggggattagaggtttttcttttaactaaaagaaaaacatcaagggaggtgcaaatagttgacacattttttttgcagttttccagaaataatttattttagggaagttcaaggttttcccatgaacctacaactttgtcattagttaacagaaagtagggtttcccagtaaatcgacaaattctcgtaaattgacacagagtaggtttttccgtaaatctaca | |||
Mapping_target | Y23H5B | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (123) | |||||
Laboratory | QX | ||||
AX | |||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar00150675 | |||
WBVar01419819 | |||||
WBVar01337227 | |||||
WBVar01430672 | |||||
WBVar01279624 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021275 | |||
Transcript | Y23H5B.4.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y23H5B.4.1:c.61-2215C>T | ||||
Intron_number | 2/7 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00037807 | |||||
Method | WGS_Pasadena_Quinlan |