WormBase Tree Display for Variation: WBVar00023846
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WBVar00023846 | Name | Public_name | WBVar00023846 | ||
---|---|---|---|---|---|
Other_name | pas16366 | ||||
cewivar00071603 | |||||
CE49916:p.Gln196Lys | |||||
CE46826:p.Gln515Lys | |||||
Y39G10AR.2c.1:c.586C>A | |||||
Y39G10AR.2a.1:c.1549C>A | |||||
CE49848:p.Gln194Lys | |||||
CE26992:p.Gln517Lys | |||||
Y39G10AR.2d.1:c.580C>A | |||||
Y39G10AR.2b.1:c.1543C>A | |||||
HGVSg | CHROMOSOME_I:g.2409508C>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y39G10AR | |
Flanking_sequences | ttttgaacagatcttcaaaacgtggtgcctccgcagtgcgtttggaaaattcaaaaaaaaaagatgattttcagccgtgtaatcgacatcttctcgagccaacttctctacccgagtgacgagttggagtttattctgcaaacttgcgaaaacgatttaccagctggaaatggtgctatgaactcggccgccatctcgctgctccccatcactatggccttggcaactgcgaatcgaatctatgaacttctcaacgaaaaggaccacgtcatccttcccgacctgacacgtcgaatcctc | aaaagtacactgcaagtatgattgaaaagtcgagacgcggtgaaacggagaccgagtacacttttgagacgaccctcccgttgcttcgtatgtataaggagggattcatgagcaagagaccgtgtatttggacttgtgagaactcgaacactgttggagcaaatgttcaggctcgtgtgctcacctccctcgagttgcagccatctctggagcatatcaatcgtcttgtgaatgattctcgtccagtttggacggctaccgaggagaagcctgcgatgatcaaggatttgaatgccgatt | |||
Mapping_target | Y39G10AR | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021460 | |||
Transcript | Y39G10AR.2a.1 (12) | ||||
Y39G10AR.2b.1 (12) | |||||
Y39G10AR.2d.1 (12) | |||||
Y39G10AR.2c.1 (12) | |||||
Method | WGS_Pasadena_Quinlan |