WormBase Tree Display for Variation: WBVar00023581
expand all nodes | collapse all nodes | view schema
| WBVar00023581 | Name | Public_name | WBVar00023581 | ||
|---|---|---|---|---|---|
| Other_name | pas16313 | ||||
| haw3569 | |||||
| haw114762 | |||||
| cewivar00071384 | |||||
| CE33221:p.Thr119= | |||||
| Y39G10AR.6.1:c.357T>G | |||||
| HGVSg | CHROMOSOME_I:g.2334195T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y39G10AR | |
| Flanking_sequences | cagaaaccaaatttcagccaagatgacgtggaaattgatatggacgaggttttaagaccattatggaccattcaaaataggccatctgactttgcaacggtgagttctggtggtggcctagaaatcccataggtggcctagaagtttcaaatgatgaattttcacattttaaattcgattattctttgaagtgcgcaaaaactcttccacggccatattcaaatttctaggccaccaacctcaaaacttagaccatgtatttcagtgcttcgaatttttcattcaaatgatgcaaacaac | tgtgcggaatttacatcaaaccgagaaattttcaaaaaactttcaaaaacggaattccacgtggcaattgcggaacctgtttcaatttgcggcctcggtatggctggagggactagtttttgagtagagggactaggttttgagtagagggactagtttttgagtagaaggactagtttccagttgggggactagttttcaagtagagggactagttttcgagtagagggactaggtttcgagtagagggactagttttcgagtagagggactaactttccaattggtggactaactttc | |||
| Mapping_target | Y39G10AR | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (67) | |||||
| Laboratory | QX | ||||
| AX | |||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00534627 | |||
| WBVar01332206 | |||||
| WBVar00150319 | |||||
| WBVar01430584 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021464 | |||
| Transcript | Y39G10AR.6.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y39G10AR.6.1:c.357T>G | ||||
| HGVSp | CE33221:p.Thr119= | ||||
| cDNA_position | 361 | ||||
| CDS_position | 357 | ||||
| Protein_position | 119 | ||||
| Exon_number | 5/10 | ||||
| Codon_change | acT/acG | ||||
| Amino_acid_change | T | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
