WormBase Tree Display for Variation: WBVar00023286
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WBVar00023286 | Name | Public_name | WBVar00023286 | ||
---|---|---|---|---|---|
Other_name | pas16254 | ||||
cewivar00071212 | |||||
F12B6.1a.1:c.2916-149G>A | |||||
F12B6.1b.1:c.2805-149G>A | |||||
HGVSg | CHROMOSOME_I:g.2264993C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F12B6 | |
Flanking_sequences | ccgcccaacttaaagcttactggctgaagagtacattgtgctgtggacaaattcctagaacatcgcgaactcttcgaagatccgttcgaatgtctcgctggtagatcttggcggttccggaactgggagcgtagaggccacagaggattgacctggaaatgtgtgtgttttttttttaattttgctgctccaaattattctaaaaaatcaatttaattttaccagaattttttaaaatttttttgaaaaaaacttcaattttaaagtttcctcctaatcattagacaggtttgaatttgc | gcctaacgttttgaaatttcatacgaatttcggaattgttggtaaacatttttggaagacaaaaaatttgaaatttgcgccagattctggaaaaattaattttaaaaagaattaaaagtatgattttttgaattttgcggggcaaatttttttagaattaaatgttgaatttcttgaaaaaaatattttgagtgaccatacacgaaattctggcttccctcataaattgaaatggaagagtttttgccgaacttggccattttggctcggccatatctgtggtagatttacggcgcgttg | |||
Mapping_target | F12B6 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000020 | |||
Transcript | F12B6.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F12B6.1a.1:c.2916-149G>A | ||||
Intron_number | 17/33 | ||||
F12B6.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F12B6.1b.1:c.2805-149G>A | ||||
Intron_number | 17/32 | ||||
Method | WGS_Pasadena_Quinlan |