WormBase Tree Display for Variation: WBVar00023196
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| WBVar00023196 | Name | Public_name | WBVar00023196 | ||
|---|---|---|---|---|---|
| Other_name | pas16236 | ||||
| cewivar00071166 | |||||
| W03F11.4.1:c.345A>G | |||||
| CE14548:p.Ser115= | |||||
| W03F11.4.2:c.345A>G | |||||
| HGVSg | CHROMOSOME_I:g.2240296T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F12B6 | |
| Flanking_sequences | aaatttgtttttgtaatgcccaaaagaacttgtgaagcgtaaaatatcactatcacttaaattgtctttgggattatcttcaatatctgaaaaagcgagttctacagattgtgcatattttgataaccccttgtaattaaaattgatagtattcaacttttgaacttcctccaaaagagcagtgtactctgatgttccattccaagtcatgaagtcattgatgaaagatccctgccggatggtttccaaaacaactaaccgctgttcaattgcagtaatttcaggagaagttttgaactt | gatggaagattctccaactcagtgattgctgtgtcgatggctgttgtgttcaagttgatgacttcttgaagcttgactggtcccgtgtgaaggagctcagcaattgcatcgtccgaggggatggatccatcaatcaaaccaatttccaacgagattccattggcgagacgagcaagtgatttgaagttgggaagactgtcggatagtgtcttggctgaagaaataataaatctagttacgggtatttattgctaccagtttctctaacattgtcacgagaagccacgttttgttttcatg | |||
| Mapping_target | F12B6 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (18) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021007 | |||
| Transcript | W03F11.4.2 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | W03F11.4.2:c.345A>G | ||||
| HGVSp | CE14548:p.Ser115= | ||||
| cDNA_position | 359 | ||||
| CDS_position | 345 | ||||
| Protein_position | 115 | ||||
| Exon_number | 3/11 | ||||
| Codon_change | tcA/tcG | ||||
| Amino_acid_change | S | ||||
| W03F11.4.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W03F11.4.1:c.345A>G | ||||
| HGVSp | CE14548:p.Ser115= | ||||
| cDNA_position | 478 | ||||
| CDS_position | 345 | ||||
| Protein_position | 115 | ||||
| Exon_number | 4/12 | ||||
| Codon_change | tcA/tcG | ||||
| Amino_acid_change | S | ||||
| Method | WGS_Pasadena_Quinlan |
