WormBase Tree Display for Variation: WBVar00021971
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| WBVar00021971 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00021971 | |||
| Other_name | pas15991 | ||||
| haw39725 | |||||
| cewivar00022293 | |||||
| Y39A3CR.4.1:c.*8T>C | |||||
| HGVSg | CHROMOSOME_III:g.1860242T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | Y39A3CR | |
| Flanking_sequences | cggagacgcagcgtcaaaaattcaccgaacaagtgcacacgctcaccggtcgctgctgggatgtgtgcttcgccgactaccgtccgccaagcaagatggacggcaagactcagacctgtattcaggtaaaaatttgggaaaatttggcaattttctgcaattttatgggaaaattgaagaaaaaatttaaaaaatccaatttttttccgtttcagaactgcgtaaaccgcatgatcgacgccagcaacttcatggtcgagcacttgtccaagatgaacggaggacacgtctaaaaatcga | gaaaatccccttttaaccttcaatttttctttgttaactgttataacacatactgtttaggctcttttccataaattttcccttaaattcgacgttttaagcgctggatcatataaaatagtgaagaaatctatgtaaatatctggaaaaacccggaaaaaaactcagaaaattgcagattttcagtgaaaaagcatgagtaaactgaaaggaagccgcctggaggcagaaatcgatcgagttagagccgatgcgaactggaagcggctctcggagcttctcccatctgtaaaatccaag | |||
| Mapping_target | Y39A3CR | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (22) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00043013 | |||
| WBVar01326177 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000941 | |||
| Transcript | Y39A3CR.4.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y39A3CR.4.1:c.*8T>C | ||||
| cDNA_position | 265 | ||||
| Exon_number | 4/4 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
