WormBase Tree Display for Variation: WBVar00020891
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| WBVar00020891 | Name | Public_name | WBVar00020891 | ||
|---|---|---|---|---|---|
| Other_name | pas15775 | ||||
| cewivar00021578 | |||||
| CE23413:p.Pro267Ser | |||||
| Y22D7AR.9.1:c.799C>T | |||||
| HGVSg | CHROMOSOME_III:g.1697855G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y22D7AR | |
| Flanking_sequences | atcgacctcaaatgtacctataatgcgtttaaaatacaagaaaatcagctcgtatccccaaaattagacggagatttcagaaaatttcgtttccgcttgacaagtcggtgtcgtaactgtttttgaaaagttttcaaaaaaatttttcagacaatttcgcggataataaatcaatacaaatgtattaaactgcaattctctcgatctcaatgcaccatctctcactcctgccgtaacaattacaggtgattttaaaattctgatagctgagcttatacacgtcctctccagagtactcgg | ctggaacacttttgcgaattcaacgggatccgagcagttttcatcgaaattcattgcacaatagttgaaagtatcgcgttttagaagatcctggaagtttatttatttatttattttagaacattatttccacctatgatctactaacttacgtctctacacttgattgcatcctcctttaaaagcttgtcaactttaattttaaacctcttgaaatggaaaaattgattgatcgaagttttcgtagtgtcaaaagcataagattccatgtaaaagtctcgagatttctggaattgctcc | |||
| Mapping_target | Y22D7AR | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (74) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01443849 | |||
| WBVar01325448 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021262 | |||
| Transcript | Y22D7AR.9.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | Y22D7AR.9.1:c.799C>T | ||||
| HGVSp | CE23413:p.Pro267Ser | ||||
| cDNA_position | 865 | ||||
| CDS_position | 799 | ||||
| Protein_position | 267 | ||||
| Exon_number | 4/5 | ||||
| Codon_change | Ccc/Tcc | ||||
| Amino_acid_change | P/S | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
