WormBase Tree Display for Variation: WBVar00020580

WBVar00020580 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar00020580
    Other_name: haw85214
      oicr_ce1429
      cewivar00245490
      CE40917:p.Asn422=
      CE31888:p.Asn456=
      C29F3.7a.1:c.1368C>T
      C29F3.7b.1:c.1266C>T
    HGVSg: CHROMOSOME_V:g.15357403C>T
  Sequence_details: SMap: S_parent: Sequence: C29F3
    Flanking_sequences: ttttgcacattgaatattacccaaa ggtaccgattcaagcaaactatttc
    Mapping_target: C29F3
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (46)
    Laboratory: RW
      QX
    Person: WBPerson1562
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      WGS_Stein
      Million_mutation_project_reanalysis
      WGS_Andersen
    History: Acquires_merge: WBVar01463403
        WBVar00603010
    Status: Live
  Affects: Gene: WBGene00007807
    Transcript: C29F3.7a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C29F3.7a.1:c.1368C>T
        HGVSp: CE31888:p.Asn456=
        cDNA_position: 1483
        CDS_position: 1368
        Protein_position: 456
        Exon_number: 8/9
        Codon_change: aaC/aaT
        Amino_acid_change: N
      C29F3.7b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C29F3.7b.1:c.1266C>T
        HGVSp: CE40917:p.Asn422=
        cDNA_position: 1266
        CDS_position: 1266
        Protein_position: 422
        Exon_number: 7/7
        Codon_change: aaC/aaT
        Amino_acid_change: N
  Reference: WBPaper00040707
  Remark: [20081124 db] this Variation was previously named hw85214
  Method: WGS_Hawaiian_Waterston