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WormBase Tree Display for Variation: WBVar00019833

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Name Class

WBVar00019833NamePublic_nameWBVar00019833
Other_namehaw35089
haw137654
cewivar00102089
E01F3.1h.1:c.*420T>A
E01F3.1a.1:c.*32T>A
E01F3.1c.1:c.*32T>A
E01F3.1b.1:c.*420T>A
E01F3.1g.1:c.*32T>A
HGVSgCHROMOSOME_II:g.14953032T>A
Sequence_detailsSMapS_parentSequenceY53F4B
Flanking_sequencescccaaattttattgattttttttcgttttttcatcctcgcggatctcgtt
Mapping_targetY53F4B
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (109)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01442637
WBVar01321451
WBVar00557519
WBVar01442638
WBVar01385836
WBVar01254023
StatusLive
AffectsGeneWBGene00008443
TranscriptE01F3.1c.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScE01F3.1c.1:c.*32T>A
cDNA_position1878
Exon_number12/12
E01F3.1b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScE01F3.1b.1:c.*420T>A
cDNA_position2521
Exon_number15/15
E01F3.1a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScE01F3.1a.1:c.*32T>A
cDNA_position1664
Exon_number10/10
E01F3.1h.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScE01F3.1h.1:c.*420T>A
cDNA_position2221
Exon_number12/12
E01F3.1g.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScE01F3.1g.1:c.*32T>A
cDNA_position1873
Exon_number13/13
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw35089
MethodWGS_Hawaiian_Waterston