WormBase Tree Display for Variation: WBVar00019833
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WBVar00019833 | Name | Public_name | WBVar00019833 | ||
---|---|---|---|---|---|
Other_name | haw35089 | ||||
haw137654 | |||||
cewivar00102089 | |||||
E01F3.1h.1:c.*420T>A | |||||
E01F3.1a.1:c.*32T>A | |||||
E01F3.1c.1:c.*32T>A | |||||
E01F3.1b.1:c.*420T>A | |||||
E01F3.1g.1:c.*32T>A | |||||
HGVSg | CHROMOSOME_II:g.14953032T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y53F4B | |
Flanking_sequences | cccaaattttattgattttttttcg | ttttttcatcctcgcggatctcgtt | |||
Mapping_target | Y53F4B | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (109) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01442637 | |||
WBVar01321451 | |||||
WBVar00557519 | |||||
WBVar01442638 | |||||
WBVar01385836 | |||||
WBVar01254023 | |||||
Status | Live | ||||
Affects | Gene | WBGene00008443 | |||
Transcript | E01F3.1c.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1c.1:c.*32T>A | ||||
cDNA_position | 1878 | ||||
Exon_number | 12/12 | ||||
E01F3.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1b.1:c.*420T>A | ||||
cDNA_position | 2521 | ||||
Exon_number | 15/15 | ||||
E01F3.1a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1a.1:c.*32T>A | ||||
cDNA_position | 1664 | ||||
Exon_number | 10/10 | ||||
E01F3.1h.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1h.1:c.*420T>A | ||||
cDNA_position | 2221 | ||||
Exon_number | 12/12 | ||||
E01F3.1g.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1g.1:c.*32T>A | ||||
cDNA_position | 1873 | ||||
Exon_number | 13/13 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw35089 | ||||
Method | WGS_Hawaiian_Waterston |