WormBase Tree Display for Variation: WBVar00018513
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WBVar00018513 | Name | Public_name | WBVar00018513 | ||
---|---|---|---|---|---|
Other_name | pas44407 | ||||
haw34825 | |||||
haw137458 | |||||
cewivar00101904 | |||||
W01D2.2b.1:c.1134+19C>T | |||||
W01D2.2a.1:c.1125+19C>T | |||||
W01D2.2d.1:c.852+19C>T | |||||
W01D2.2c.1:c.843+19C>T | |||||
HGVSg | CHROMOSOME_II:g.14816388G>A | ||||
Sequence_details | SMap | S_parent | Sequence | W01D2 | |
Flanking_sequences | aaatattagtttgaattagataaaa | ttggctttcgtcttctaccattata | |||
Mapping_target | W01D2 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (28) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01385426 | |||
WBVar01253809 | |||||
WBVar00557323 | |||||
WBVar01321060 | |||||
WBVar00232631 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003651 | |||
Transcript | W01D2.2d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W01D2.2d.1:c.852+19C>T | ||||
Intron_number | 3/3 | ||||
W01D2.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01D2.2c.1:c.843+19C>T | ||||
Intron_number | 3/3 | ||||
W01D2.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01D2.2b.1:c.1134+19C>T | ||||
Intron_number | 6/7 | ||||
W01D2.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01D2.2a.1:c.1125+19C>T | ||||
Intron_number | 6/7 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw34825 | ||||
Method | WGS_Hawaiian_Waterston |