WormBase Tree Display for Variation: WBVar00017601
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| WBVar00017601 | Name | Public_name | g320 | ||
|---|---|---|---|---|---|
| Other_name | pas15117 | ||||
| snp_C39E6[4] | |||||
| haw102580 | |||||
| LSJ2_238 | |||||
| oicr_ce77 | |||||
| cewivar00056234 | |||||
| C39E6.6.1:c.643G>T | |||||
| CE06941:p.Val215Phe | |||||
| HGVSg | CHROMOSOME_X:g.4768788C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C39E6 | |
| Flanking_sequences | accatggtaactaggattgacgttgttctaaaacacaaatagtatttcggttagaaaccttgcatttaataccttctgttctgaagtacaactcgttgtttctccttttcctgtttgtctagaaattcgttcaactggaacgaaatcaaatgtgaatttttaatttgaaaatcaataaaactacctcattttcatactgttcaagaccatgcgacgggaatgcgcaagagctctccaacgcgcttgttctctccaccattttgcgtatctttgtctgagcacgcttgctgagcaccgaaa | aatatttgcatagcagaaggccatgacagcgaatgggaccacgaattgggcgagcatcacgatcattgtgtaggctcttctagacttggcagattcccacttttcagtgcaaaagtagccgcatattctctcttcctgaaacgagggtactagttgtataagaagttgaatacctagaaaaaaacgacactcactgtgtattcaatcatttgcatattgaacgcatagggtagagttacaacaaaagagaggatccacaatagaacagtagtaagaaatgctcctctttgggatagtggt | |||
| Mapping_target | C39E6 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (45) | |||||
| Laboratory | AX | ||||
| RW | |||||
| CX | |||||
| RC | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_McGrath | |||||
| WGS_Stein | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge (10) | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00003807 | |||
| Transcript | C39E6.6.1 (12) | ||||
| Genetics | Mapping_data | 2_point | 3636 | ||
| 3635 | |||||
| Description | Phenotype (8) | ||||
| Reference (11) | |||||
| Method | WGS_Pasadena_Quinlan |
