WormBase Tree Display for Variation: WBVar00017596
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| WBVar00017596 | Name | Public_name | WBVar00017596 | ||
|---|---|---|---|---|---|
| Other_name | pas15116 | ||||
| haw102467 | |||||
| LSJ2_237 | |||||
| cewivar00056231 | |||||
| C46C11.4.1:c.940G>T | |||||
| CE45782:p.Ala314Ser | |||||
| HGVSg | CHROMOSOME_X:g.4645197C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C46C11 | |
| Flanking_sequences | agccgagaaaactaatgttgcaactgtgaaaagttaaactgtttaaaatatacaagtttcagaaacttaaaatataaaactttcatttggctttaaaaatttcggaattgacaataaagtttggagtttaccagacggctggtataatatatatgaatttaaaagacactcacttatatattctcggctggcgagtcaggttcctcactttgtcattaataccatttaatgcttctccccaaggtagtgcactttcaaaggcatggagttgtagaattcggaagtttggcagattgccag | taaccagtgacgaatgaacatattaatatctcgtaatgtcaatttgttcaaccatagatggatttcttcgcattccatgttcatcaaatcttgtatggttattttctcgccgtagaccactttcagtcgcggaatatttcggagctggaagaattttttaatatgcattttccttacaaaatatctagaaatttttactttccctgaacatatgaattttccgccacaatgagtttaatgagaaatgtcagagttcaaacttgataggaacggaaaattacgctggatatttgtaatagt | |||
| Mapping_target | C46C11 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (207) | |||||
| Laboratory | QX | ||||
| RW | |||||
| CX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_McGrath | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01468617 | |||
| WBVar00601518 | |||||
| WBVar00078107 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00044567 | |||
| Transcript | C46C11.4.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | C46C11.4.1:c.940G>T | ||||
| HGVSp | CE45782:p.Ala314Ser | ||||
| cDNA_position | 1026 | ||||
| CDS_position | 940 | ||||
| Protein_position | 314 | ||||
| Exon_number | 6/8 | ||||
| Codon_change | Gct/Tct | ||||
| Amino_acid_change | A/S | ||||
| Reference | WBPaper00040097 | ||||
| WBPaper00040707 | |||||
| Method | WGS_Pasadena_Quinlan |
