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WormBase Tree Display for Variation: WBVar00017196

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Name Class

WBVar00017196EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00017196
Other_namepas15036
cewivar00070174
Y71G12A.2c.3:c.-15-91G>A
Y71G12A.2c.1:c.-15-91G>A
Y71G12A.2c.4:c.-106G>A
Y71G12A.2c.2:c.-15-91G>A
Y71G12A.2b.1:c.2485-91G>A
HGVSgCHROMOSOME_I:g.1916943G>A
Sequence_detailsSMapS_parentSequenceY51F10
Flanking_sequencescgtagaagtggaaaaacaaatagctcttagaaccattgtctgaaactattttcaaattcacgtggtgccaggggctgtcccattgcggtttgatctacaaaaaatgcgggatttttttgcccaaaaaaaggggcgtcagcacactttcccatgcgaaatcagttgagaactctgcgtctcttctcccgcattttttgtagatcaacgtagatcaaaccgaaatgggacacgatgacgccatgtgtggtttctcctacctactgtagcctccagctagccgtaaacaatatatataaacaacaaattcagcatttctttgaaatgtgttgaattgataacaaaactactgtagaattcaataaaaaaatattgatctacttttttttccagattctcgtaaaatggatggatcgtcgctacaatctatcgctgcaattcgtgccggtgatggtgatcaacagtaaaacgtcaatgttaactacggagtatgtggaattggaaaattggaagattgaaaattcagaaccaaaatggtccaaaactaccaattttcgtaatgagacgttctgaaaatttttcaaaaaaagttatggtggttca
Mapping_targetY51F10
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (58)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01430392
StatusLive
AffectsGeneWBGene00022138
WBGene00219760
TranscriptY51F10.14
Y71G12A.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2c.1:c.-15-91G>A
Intron_number9/14
Y71G12A.2c.4VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScY71G12A.2c.4:c.-106G>A
cDNA_position527
Exon_number1/6
Y71G12A.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2b.1:c.2485-91G>A
Intron_number11/15
Y71G12A.2c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2c.2:c.-15-91G>A
Intron_number6/11
Y71G12A.2c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2c.3:c.-15-91G>A
Intron_number4/9
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan