WormBase Tree Display for Variation: WBVar00016496
expand all nodes | collapse all nodes | view schema
WBVar00016496 | Name | Public_name | WBVar00016496 | ||
---|---|---|---|---|---|
Other_name | pas14896 | ||||
cewivar00067632 | |||||
R06A10.2b.1:c.105+349A>G | |||||
R06A10.2a.1:c.384+349A>G | |||||
HGVSg | CHROMOSOME_I:g.1070836A>G | ||||
Sequence_details | SMap | S_parent | Sequence | R06A10 | |
Flanking_sequences | aatgatcagaatcagaaaaaattaaaaaaaaaaaagaaacaaaaactaaaactgtaacctaatttgttggaacaaactttgaagcagtggtaggcggcagacgattttttcggacaaatcggcaaatcggcaaattgccgaaattgaaatttcctgcaaaccgtcgcccacccctgctttgaagttaaatataatagcataaccataaacatttcaaaatttccattagggatcttaaaaagagaaagtttttagtagcaattttttcataatttaagatgaaattttttgaacacgttc | aaaagtctaaaagtataagatttttaaacgacatcagttccaaatttttgtcaaatatcgattaattttttaaagcggtacgcattaaaaatgtctaaagtctgatagtcttgcacctatatttacgaccagaacgtctcatttcggcttgatctacgtagatctacaaaaaatgcgggagacgagacgccgagttctcaactgattttgaatggttaagaacgtgttcacgtcatatttttttgggaacgaaattcccgcattttttgtagatcaaaccgtaatggggcattttaggac | |||
Mapping_target | R06A10 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001745 | |||
Transcript | R06A10.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R06A10.2a.1:c.384+349A>G | ||||
Intron_number | 4/8 | ||||
R06A10.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R06A10.2b.1:c.105+349A>G | ||||
Intron_number | 1/5 | ||||
Method | WGS_Pasadena_Quinlan |