WormBase Tree Display for Variation: WBVar00016396
expand all nodes | collapse all nodes | view schema
WBVar00016396 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00016396 | |||
Other_name | pas14876 | ||||
cewivar00069508 | |||||
CE43623:p.Thr287= | |||||
Y71G12B.35.1:c.861G>A | |||||
HGVSg | CHROMOSOME_I:g.1673060C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y71G12B | |
Flanking_sequences | aaattgaaaacctctataaaaagtatataaaaagatatattttgtgggtgcaatcccgattttcaaaaaaaaaaaaccaaaaatttgagaagaatcaataaatcaataattttattcaaaatggctatgcgccgacgagatcgacatatcaacttctgccacaccaaacgggctcgtcgatttttctacaagcacatttgagtcgaaggagccaaagtggtgatctaccacatcatcatcctcaatgacacgtggtgtcgccacgattcttcctcgacttgttacagtaatcacattgtc | gttgaccgtaactgcactacttctccctcactgatatccgatattgctgtgctgattggtgagagaaatggggatttttccacgaattccgatccccgggggtcatcgttctccaagacgcgtggtgtcactattatattgcaattcgtgccgatttctgctgtctgaaaaaatatacataatttcggagaaaactatggctcccatgaggtcgccgcgccggccgcctcacggcgtcactcacgtcgaatgtatttcaactagggctgtacaaatcggcgtccggtcgtccaattttga | |||
Mapping_target | Y71G12B | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (61) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01430300 | |||
Status | Live | ||||
Affects | Gene | WBGene00185098 | |||
Transcript | Y71G12B.35.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y71G12B.35.1:c.861G>A | ||||
HGVSp | CE43623:p.Thr287= | ||||
cDNA_position | 869 | ||||
CDS_position | 861 | ||||
Protein_position | 287 | ||||
Exon_number | 6/7 | ||||
Codon_change | acG/acA | ||||
Amino_acid_change | T | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |