WormBase Tree Display for Variation: WBVar00015876
expand all nodes | collapse all nodes | view schema
WBVar00015876 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00015876 | |||
Other_name | pas14772 | ||||
cewivar00069042 | |||||
Y92H12A.2a.1:c.741+988A>G | |||||
HGVSg | CHROMOSOME_I:g.1546751A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y92H12A | |
Flanking_sequences | gcttaacaaactcggaaaaattatatattttttggagcaccaaaactactgaattcttaacacacctctggtttctgaacaagttaggtgtagtgtgtctgcttaaacatcaaaataactcaatttgttgtcattttactaaatttttggcgaaaaaatcaacagttttattcaaaattgtactgtcaaattttgacgtgtgcggcaaatttcgaaatttgccgagctcggcaaattcggcaaattcggcaaatttgccgcacacgcctggtttcaaataagcgaattctggtttatttt | aaatgtgtgttatcaaaaaacaaattgatacttaaaaagagacactgagaaatgtgaaatgatttttatttttatttttttaaatttagctattaattcttgtagatcgatttcctctactttttgaaaactagtatttatcatttttagcaaaattgtatcccaaattcaaacattcacgttctgtcctccggatattagtcctttaaattaatttttttctgaaaatcaaaaaaaaaacgtttccaaattcaggagctacatttaaaaaagacaatcaattttacttatttctattat | |||
Mapping_target | Y92H12A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (95) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01430236 | |||
Status | Live | ||||
Affects | Gene | WBGene00022358 | |||
Transcript | Y92H12A.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y92H12A.2a.1:c.741+988A>G | ||||
Intron_number | 6/12 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |