WormBase Tree Display for Variation: WBVar00015551
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WBVar00015551 | Name | Public_name | WBVar00015551 | ||
---|---|---|---|---|---|
Other_name | pas14707 | ||||
haw2067 | |||||
cewivar00068715 | |||||
F47G6.4c.1:c.194+159G>A | |||||
F47G6.4b.1:c.728+159G>A | |||||
F47G6.4a.1:c.2759+159G>A | |||||
HGVSg | CHROMOSOME_I:g.1460888G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F47G6 | |
Flanking_sequences | aagcggccgactcgacgaccggtgagctcgatgagcttgtcaagacaatcaagaatgacgatttaaacacggaaattgatcgagctgtcaagtgctatgaggattgcgttaaacgcgtcgattccatcattgccgacttgaagtgagcaatttttttagggagctcttagagggagaatctcagaaatttggttgaaaaaaacatatttttaatgtgaaaatagaaattttccaaccgaaaactgaaatatctcaccacagaagcactttgttcgttagagcacgtctgcagaacaacgg | ctcacgggaattcaaattttttgtcaattctttggattaagagtgagaaaaatggttttgtaaaaagcgtttttccggaatttttcctcattgtatgtttttggaatgtgccaatttttgagagaaaactcaatttttacccgccaacagatttagttcaatagttcaatagagcgcaccggcagacgcgcgggaatttgaacttctctgttagcttgcaatgccacctggtgccaggctgtcccatgaaggtttgatctacaataagcgcggaaattttttgcccaacaaaaatgtcac | |||
Mapping_target | F47G6 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (92) | |||||
Laboratory | QX | ||||
AX | |||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01430180 | |||
WBVar00148817 | |||||
WBVar01307284 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004969 | |||
Transcript | F47G6.4c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F47G6.4c.1:c.194+159G>A | ||||
Intron_number | 2/7 | ||||
F47G6.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F47G6.4a.1:c.2759+159G>A | ||||
Intron_number | 13/19 | ||||
F47G6.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F47G6.4b.1:c.728+159G>A | ||||
Intron_number | 5/10 | ||||
Reference | WBPaper00040707 | ||||
WBPaper00037807 | |||||
Method | WGS_Pasadena_Quinlan |