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WormBase Tree Display for Variation: WBVar00015551

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Name Class

WBVar00015551NamePublic_nameWBVar00015551
Other_namepas14707
haw2067
cewivar00068715
F47G6.4c.1:c.194+159G>A
F47G6.4b.1:c.728+159G>A
F47G6.4a.1:c.2759+159G>A
HGVSgCHROMOSOME_I:g.1460888G>A
Sequence_detailsSMapS_parentSequenceF47G6
Flanking_sequencesaagcggccgactcgacgaccggtgagctcgatgagcttgtcaagacaatcaagaatgacgatttaaacacggaaattgatcgagctgtcaagtgctatgaggattgcgttaaacgcgtcgattccatcattgccgacttgaagtgagcaatttttttagggagctcttagagggagaatctcagaaatttggttgaaaaaaacatatttttaatgtgaaaatagaaattttccaaccgaaaactgaaatatctcaccacagaagcactttgttcgttagagcacgtctgcagaacaacggctcacgggaattcaaattttttgtcaattctttggattaagagtgagaaaaatggttttgtaaaaagcgtttttccggaatttttcctcattgtatgtttttggaatgtgccaatttttgagagaaaactcaatttttacccgccaacagatttagttcaatagttcaatagagcgcaccggcagacgcgcgggaatttgaacttctctgttagcttgcaatgccacctggtgccaggctgtcccatgaaggtttgatctacaataagcgcggaaattttttgcccaacaaaaatgtcac
Mapping_targetF47G6
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (92)
LaboratoryQX
AX
RW
PersonWBPerson6900
WBPerson1730
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WGS_Andersen
HistoryAcquires_mergeWBVar01430180
WBVar00148817
WBVar01307284
StatusLive
AffectsGeneWBGene00004969
TranscriptF47G6.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF47G6.4c.1:c.194+159G>A
Intron_number2/7
F47G6.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF47G6.4a.1:c.2759+159G>A
Intron_number13/19
F47G6.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF47G6.4b.1:c.728+159G>A
Intron_number5/10
ReferenceWBPaper00040707
WBPaper00037807
MethodWGS_Pasadena_Quinlan