WormBase Tree Display for Variation: WBVar00013586
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| WBVar00013586 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00013586 | |||
| Other_name | pas14314 | ||||
| cewivar00078101 | |||||
| R07C3.16:n.102C>T | |||||
| HGVSg | CHROMOSOME_II:g.920306G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | R07C3 | |
| Flanking_sequences | gcattattattgatactcgtgaacccatcgcgacaacgtgctggactacgtggagttgtagttgtacttcttatgtaggtggtggtgatagtttcaatagttacggtactactcggtaagggaacttgacatatatatcccaacagcgcgttttgattagacacccattttccagcgaaacttcccgattgcaacagagatacatgttgtctgacgctcacatcggggttgcctgaagtttaagttttacaactttacaactttttatctgtgttcacctgaaactcgaattcaatctta | aaatgagtacacctactaatttgcacacaagtttgatcattcaatagagagaagccactggggcagccagaatagtcacgagtagttgtggttggtgttgtttaccaatcaaaaagctttgagggagaaattgccccgaattgcagaagaaataatacgaaaaacttcatctcgcgacttctttttcagaaatcaaatggcttttacgcaaattttcaacaagtcataagcctcttaactatgattatcagcttctgataacgattctttcgaaatatctaaattttgatgtggaaccgg | |||
| Mapping_target | R07C3 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (33) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01435664 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00269338 | |||
| WBGene00305555 | |||||
| Transcript | R07C3.18 | ||||
| Pseudogene | R07C3.16 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07C3.16:n.102C>T | ||||
| cDNA_position | 102 | ||||
| Exon_number | 1/3 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
