WormBase Tree Display for Variation: WBVar00013021
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WBVar00013021 | Name | Public_name | WBVar00013021 | ||
---|---|---|---|---|---|
Other_name | pas14201 | ||||
cewivar00077803 | |||||
CE32064:p.Val329= | |||||
T07D3.9a.1:c.987T>C | |||||
CE51163:p.Val284= | |||||
T07D3.9b.1:c.852T>C | |||||
T07D3.9a.2:c.987T>C | |||||
HGVSg | CHROMOSOME_II:g.898593A>G | ||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | |
Flanking_sequences | ttcggattctcgacgctttccatcgtgaagttgaacacatttgtgttgacgcgagcctacaaaatcatacaaatcggaaacttgagtctttaagctcttcaagcttctcctcacctcttcaccgagcgtcggatgattcaacttggcgagctcggggagcttgtgctgatccgaaatcgtcgccgctaccttcacctgcacatattttccatcggtgtatgtgacgaatgagtcaaagtgcaggacatgcccaatttccacaggcttctggaactcaatctgatccatggatcggatggc | acacgacctttgcagtagagcttggcgttcgtgtgagccagctccaaggcttttcgcatcaagaaaccgccgaaaatctttccgtacatgttttggtattctgggaagcagatttcagtgaccgagaggtttgtcttgtgcatccacatttcagtgttctggaagttgcatgattacaaagattctgtgggggatcctgtagatttacgggaggatctgtgtggatttacggaaagcttgtgtagatttacgggaaactggtgtagatttacggggaactaatctagattcatggagtat | |||
Mapping_target | T07D3 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020311 | |||
Transcript | T07D3.9a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T07D3.9a.1:c.987T>C | ||||
HGVSp | CE32064:p.Val329= | ||||
cDNA_position | 994 | ||||
CDS_position | 987 | ||||
Protein_position | 329 | ||||
Exon_number | 7/9 | ||||
Codon_change | gtT/gtC | ||||
Amino_acid_change | V | ||||
T07D3.9b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T07D3.9b.1:c.852T>C | ||||
HGVSp | CE51163:p.Val284= | ||||
cDNA_position | 1004 | ||||
CDS_position | 852 | ||||
Protein_position | 284 | ||||
Exon_number | 7/8 | ||||
Codon_change | gtT/gtC | ||||
Amino_acid_change | V | ||||
T07D3.9a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T07D3.9a.2:c.987T>C | ||||
HGVSp | CE32064:p.Val329= | ||||
cDNA_position | 1040 | ||||
CDS_position | 987 | ||||
Protein_position | 329 | ||||
Exon_number | 8/10 | ||||
Codon_change | gtT/gtC | ||||
Amino_acid_change | V | ||||
Method | WGS_Pasadena_Quinlan |