WormBase Tree Display for Variation: WBVar00012986
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| WBVar00012986 | Name | Public_name | WBVar00012986 | ||
|---|---|---|---|---|---|
| Other_name | pas14194 | ||||
| cewivar00077790 | |||||
| T07D3.9b.1:c.1137C>T | |||||
| T07D3.9a.1:c.1272C>T | |||||
| CE32064:p.Ser424= | |||||
| T07D3.9a.2:c.1272C>T | |||||
| CE51163:p.Ser379= | |||||
| HGVSg | CHROMOSOME_II:g.898250G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T07D3 | |
| Flanking_sequences | attcttggtgaatactttcaaatgacaaatgtcacgttacgaagtttcgctgtcaaatgaaagtctttccttgtaagcttgaaaaagaacaaaactagtacgtatcctacggtttttattgaagagacaacaggttttctagaaatacctcgagttctctaaagtagaaaacaagaacttttttctgatgatacattcatggttctctaatattaacaaaacaagttcaatgttttgagaataagcttatttcacaattcttttcagcgtattgttcagcagccgacgtccttccaggta | cttgtggtgtgcacatagtgctttggaaccacacggagcacattcggattctcgacgctttccatcgtgaagttgaacacatttgtgttgacgcgagcctacaaaatcatacaaatcggaaacttgagtctttaagctcttcaagcttctcctcacctcttcaccgagcgtcggatgattcaacttggcgagctcggggagcttgtgctgatccgaaatcgtcgccgctaccttcacctgcacatattttccatcggtgtatgtgacgaatgagtcaaagtgcaggacatgcccaatttc | |||
| Mapping_target | T07D3 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020311 | |||
| Transcript | T07D3.9a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T07D3.9a.1:c.1272C>T | ||||
| HGVSp | CE32064:p.Ser424= | ||||
| cDNA_position | 1279 | ||||
| CDS_position | 1272 | ||||
| Protein_position | 424 | ||||
| Exon_number | 8/9 | ||||
| Codon_change | agC/agT | ||||
| Amino_acid_change | S | ||||
| T07D3.9b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | T07D3.9b.1:c.1137C>T | ||||
| HGVSp | CE51163:p.Ser379= | ||||
| cDNA_position | 1289 | ||||
| CDS_position | 1137 | ||||
| Protein_position | 379 | ||||
| Exon_number | 8/8 | ||||
| Codon_change | agC/agT | ||||
| Amino_acid_change | S | ||||
| T07D3.9a.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | T07D3.9a.2:c.1272C>T | ||||
| HGVSp | CE32064:p.Ser424= | ||||
| cDNA_position | 1325 | ||||
| CDS_position | 1272 | ||||
| Protein_position | 424 | ||||
| Exon_number | 9/10 | ||||
| Codon_change | agC/agT | ||||
| Amino_acid_change | S | ||||
| Method | WGS_Pasadena_Quinlan |
