WormBase Tree Display for Variation: WBVar00012841
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| WBVar00012841 | Name | Public_name | WBVar00012841 | ||
|---|---|---|---|---|---|
| Other_name | pas14165 | ||||
| snp_T07D3[3] | |||||
| haw17045 | |||||
| cewivar00077691 | |||||
| T07D3.6:n.824A>T | |||||
| HGVSg | CHROMOSOME_II:g.881680A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T07D3 | |
| Flanking_sequences | tatttcaggtcgctgtaaatttaaatcactctcccataacatacttaaattcaaaattggacataattttctacgaaaacgaccctctcagggattacttggatctaaaatcagaagttcggaggctgattcctaagtaatttatttttgaaatcctaaataattttggaaattttttttcagaaaatttcagactcactgggttgacaatatagaaattccgacgaatatcaagcagttctctgaattttggaagcgctcaaagtttattgattgtttgaaattaaaagttccacgaga | gaatcttatgtaagtgaaacggaattacgtacctacctcatgcctgccagcgtacgtccataatttatgttgatctgtttgcctcaagcctacctacgtgcctacctcatgcatgtttacctgcgtgccaaccttgtgttgtctgcctatcacatgcctacctacgtacctacctgagtctttacctcatgcctatctacttacatatctcacgaaaaagttatagatcttcaggtcttcatgccagcggaagcagctgtaaatgagctcgcgcagctccgcgacgagctcatcgagttc | |||
| Mapping_target | T07D3 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (11) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00163795 | |||
| WBVar01358955 | |||||
| WBVar01293047 | |||||
| WBVar00246131 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020309 | |||
| Pseudogene | T07D3.6 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T07D3.6:n.824A>T | ||||
| cDNA_position | 824 | ||||
| Exon_number | 6/10 | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
